PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g622990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 243aa MW: 28357.9 Da PI: 7.3732

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g622990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4.1e-15	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll +++++ G g W+ ++ + g+ R++k+c++rw++yl Pd.00g622990.m01 10 KGAWTREEDDLLRQCIEKQGEGKWHQVPYKAGLSRCRKSCRLRWLNYL 57 79********************************************97 PP
2	Myb_DNA-binding	47.4	4.4e-15	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ W++Iar+++ gRt++++k++w++ Pd.00g622990.m01 63 RGDFMEDEVDLIIRLHKLLGNR-WSLIARRLP-GRTANDVKNYWNT 106 678889**************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MEGYNLGVRK GAWTREEDDL LRQCIEKQGE GKWHQVPYKA GLSRCRKSCR LRWLNYLKPN 60 IKRGDFMEDE VDLIIRLHKL LGNRWSLIAR RLPGRTANDV KNYWNTRLRT DYCMKKMKDK 120 SQETIKTIIR PQPRRFTKSS NCLSFKEPIL DHTQLEENFS TASQTSTSTR IGSDWWETFL 180 DDKDATETAT GSGLGLDEEL LASFWVDDDM PQSTRTCVNF SEEGLSRGDF SFSVDLWNHS 240 NEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-66	MYB family protein