PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g620270.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 588aa MW: 64219.1 Da PI: 7.5804 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.5 | 3.7e-30 | 285 | 344 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Pd.00g620270.m01 285 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCADDMSILITTYEGSHNHP 344 58**************************999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 588 aa Download sequence |
MPKRRSKAME NNNTEENSFL GNTPVEDKTK KSDGHDEEGT SMEMEISKSS SSMDITIQRG 60 HGWLAEPEQT NTSMPSSSAG KDRALIKHPQ EDELQSAKAE MGEVKEENDR LKLLLSRIVR 120 NYQSLQMHFH GLLQKDEEAR KSMDPSSSAR DQSNEQDEEA DELVSLSLGR SSSTDQPRKD 180 EQMIKTSHFS KNGKGDDEEG LNGAGLALEL GCRFEPAADQ STEVVMKNSS SDNSCGDPKE 240 DDPTKLWPPS KTSKTTRSGD DEVSQQTYLK KARVSVRARC DAPTMNDGCQ WRKYGQKIAK 300 GNPCPRAYYR CTVSPSCPVR KQVQRCADDM SILITTYEGS HNHPLPMSAT AMASTTSAAA 360 SMLQSYSSTS QQGHTAMVPI SASTNLQGLN FSTSTLSQNS RLPQHFYFPN SSISTTNSHP 420 TVTLDLTAPS PSHFGRFPAA VFSSNPRYPS TCLNFSSSPS SSLDHNNHTL QLQAPWNNNH 480 TAAGYLNYGN RLMLTETIAS ATKAITSNPK FQSALAAALT SFVAQPPTHL PHTIRAIATQ 540 LCNQPKLLGR KRWRVDGVAR CRLGTINSRG AAAESRGPMS NDDSTGAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 7e-70 | WRKY family protein |