PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g619870.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 524aa    MW: 60135.7 Da    PI: 9.3254
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g619870.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.91.8e-132210313100
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                        +  ++pkkf++++g +   s  + l+ ++g +W+++l  r+  g+ ++ kGW eF +   L+   ++vF+++g+s+f  ++ +f+ks
  Pd.00g619870.m01  22 CAVQSIPKKFLRKYGDD--LSNPVLLKLPNGSKWNIEL--RRWEGEAWFDKGWPEFSEFYSLEHCHSLVFRYEGNSKF--HICIFDKS 103
                       45569*********988..66679999***********..88888899**************************9999..****9985 PP
2B342.51.2e-13234321999
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++ +++ ++l  +f   +g+ +++s  ++l d+ gr W v++    k++   +++GW eFv+ n+L+++D++vF l+++++  + v +fr+
  Pd.00g619870.m01 234 SYISRHPMWLTSDFSILMGHLSKNSANVILSDLGGRAWVVEF--IAKPR-AKFQSGWHEFVRGNNLNSNDVCVFVLIDDTRLVFEVVIFRA 321
                       445555677777776555555667889***************..55554.469************************99998888888875 PP
3B353.16e-17434522598
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                        +++ +   + l lp +f++eh ++   + +++l+ ++ rsW v+l  +k+++++ l+  W +Fv++n+Lk gD++vF+l+++ +   ++v +
  Pd.00g619870.m01 434 IIRPTNICGCYLALPAEFVKEHLNQA--HDKVILRVSDERSWHVNL--CKYGRAFRLQ-RWMRFVRENDLKLGDVCVFELINNiKPL-FNVAL 520
                       56677788899***********6553..348***************..**********.9********************9986655.67777 PP

                       E- CS
                B3  97 fr 98 
                       fr
  Pd.00g619870.m01 521 FR 522
                       76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MSWPQKDQLR FSLYDQSDDT FCAVQSIPKK FLRKYGDDLS NPVLLKLPNG SKWNIELRRW  60
EGEAWFDKGW PEFSEFYSLE HCHSLVFRYE GNSKFHICIF DKSFIEIEYP LTMPEMKETD  120
ADDDSSDESD DHSDDASLEI LDKFPPCPRK SKGKSSLPCP RPHKKKRTSS SGNVDFPAKR  180
HDRGTSSTPR FLKRTQVVRG RMHPLTTSGK ALALQRAKAY KSDKPSFIVP MHRSYISRHP  240
MWLTSDFSIL MGHLSKNSAN VILSDLGGRA WVVEFIAKPR AKFQSGWHEF VRGNNLNSND  300
VCVFVLIDDT RLVFEVVIFR AVEAANCTLS PADVDGEETD EDDDSVDSLD DFPPCPKTRK  360
ISPIAPQPHK KNRTCSTSKA KNIEHVCGSS KTRKFVIRRP EVPRRMHPVA ASGKDRALLR  420
ANAYKSKYPS FTAIIRPTNI CGCYLALPAE FVKEHLNQAH DKVILRVSDE RSWHVNLCKY  480
GRAFRLQRWM RFVRENDLKL GDVCVFELIN NIKPLFNVAL FRTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-32B3 family protein