PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g619300.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 214aa MW: 24627.7 Da PI: 7.2589 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.1 | 1.7e-19 | 59 | 112 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++t+eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ Pd.00g619300.m01 59 KRKLTAEQVNLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKN 112 5689************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 118.7 | 3.1e-38 | 58 | 149 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+l++eqv+lLE +F +e+kLe+e+K +la+eLgl+prqvavWFqnrRAR+k+k+lE++y+ Lk+++d+ ++en++Le+e+++L+e+l+e Pd.00g619300.m01 58 KKRKLTAEQVNLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSNLKKEHDSTVSENRKLESEMSKLKEQLSE 149 9****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MTTKTNHQVV EEDDHMLLIS HLYPSDVYTQ IVPQQGASKP KRRRKKSKSG EAGGAGLKKR 60 KLTAEQVNLL ELNFGNEHKL ESEKKDRLAS ELGLDPRQVA VWFQNRRARW KNKKLEEEYS 120 NLKKEHDSTV SENRKLESEM SKLKEQLSEA AKEIQRLSER VDHGGSSNSP SSSLSMDAID 180 PPFLGEFGVE EYDGVFYMPQ NNYIHGMEWM NLYM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 41 | 60 | KRRRKKSKSGEAGGAGLKKR |
2 | 41 | 61 | KRRRKKSKSGEAGGAGLKKRK |
3 | 42 | 61 | KRRRKKSKSGEAGGAGLKKR |
4 | 42 | 62 | KRRRKKSKSGEAGGAGLKKRK |
5 | 43 | 63 | KRRRKKSKSGEAGGAGLKKRK |
6 | 44 | 64 | KRRRKKSKSGEAGGAGLKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 2e-66 | HD-ZIP family protein |