PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g618230.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 495aa MW: 56756.1 Da PI: 7.821 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 60.8 | 4.1e-19 | 42 | 125 | 4 | 90 |
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 n+YA + GFs+rk + ++ ++n+ + +r+f Cskeg++ +e+ e ++ +r trtgCka ++ + e +g w+++ ++ HnHe+a Pd.00g618230.m01 42 NTYAFNKGFSIRKGHLRRDSQNN-VRQREFLCSKEGFQVDEDLC-EAKKVRRLDTRTGCKAVIRFTVE-NGMWKLSYINPVHNHEFA 125 89****************97766.****************9998.99999*****************9.***************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 495 aa Download sequence |
MDSDFQSKSL EKSDEEALFG ESDELRVGME VSDESEAYQL CNTYAFNKGF SIRKGHLRRD 60 SQNNVRQREF LCSKEGFQVD EDLCEAKKVR RLDTRTGCKA VIRFTVENGM WKLSYINPVH 120 NHEFAKPEER QFLRSGRNIP SVRANILGSK SDGSIRPAKS HSYLGKEFGS DENDGSTNKD 180 LPNCLQRKFQ NSWDDMIKMF NLESNLWLKM LYSLREKWCP AFSLDTFSAN IGSSQRGENT 240 NTIFHQVSRK TVDLVSFVQH YEQKTKKMRF TELEEDFRCK NAMPHLRVNS GIFKHAATEY 300 TVKMYSFFEN ELMSIFGVRM VEVGNNGNQY IYEAIEEGHQ RVYMIQYNST TSMISCSCKL 360 FESMGLLCRH ALKVLDFKNY TSIPTQYIVK RWTKGAKKGI VVSNEFCKSS YRKAKSAQSL 420 RLSELMHEGN NVFSIGSLCD SGTRIVRQKL AETIKLLEND EETTNILGSL SKVDDQSVRD 480 MLLDNGSVES SSCDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-35 | FAR1 family protein |