PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g618210.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 414aa MW: 47965.5 Da PI: 8.6978

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g618210.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.3	7.8e-21	14	97	4	90
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 n+YA + GFs+rk + ++ +n+ + +r++ Cskeg++++e+ e ++ +r trtgCka ++ + + +g w++++++l+HnHe+a Pd.00g618210.m01 14 NTYAFRKGFSIRKGNIRRDAQNK-VRQRDYFCSKEGFQSDEDLC-EVKKVRRLDTRTGCKALIRFTVD-NGIWKISHINLDHNHEFA 97 89************9996666.*************999.899999************9.**************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEVSNETEAY NLCNTYAFRK GFSIRKGNIR RDAQNKVRQR DYFCSKEGFQ SDEDLCEVKK 60 VRRLDTRTGC KALIRFTVDN GIWKISHINL DHNHEFAKPE ERQFLRSGRH IPCVRAEFEA 120 TWNDLIRKFN LESNSWLQEL YSLREKWCPA FSLDTFTANF RSSNRGESIT STFHQISTKT 180 MDLIGLVQHY EKKTKVVRSA ELEEDFRCKN GTPHLRANSG IFKHAASEYT IKMYSFFENE 240 LMSIFGVRMI EVGNDGNQYI YEAIEEGHPR VYIIEYNSAT SMVSCSCKLF ESIGLLCRHA 300 LKVLDLKNFT SIPTRYIVKR WTKGAKKRIV QSSHLYESSY KKGKSAQSLR LSELMHEGNN 360 VFSIGSLCDS GTRIVKQKLV EAMKLLESDE ETTSMQGNLN KVDDQFVRDV LLDN

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEVSNETEAY NLCNTYAFRK GFSIRKGNIR RDAQNKVRQR DYFCSKEGFQ SDEDLCEVKK  60
VRRLDTRTGC KALIRFTVDN GIWKISHINL DHNHEFAKPE ERQFLRSGRH IPCVRAEFEA  120
TWNDLIRKFN LESNSWLQEL YSLREKWCPA FSLDTFTANF RSSNRGESIT STFHQISTKT  180
MDLIGLVQHY EKKTKVVRSA ELEEDFRCKN GTPHLRANSG IFKHAASEYT IKMYSFFENE  240
LMSIFGVRMI EVGNDGNQYI YEAIEEGHPR VYIIEYNSAT SMVSCSCKLF ESIGLLCRHA  300
LKVLDLKNFT SIPTRYIVKR WTKGAKKRIV QSSHLYESSY KKGKSAQSLR LSELMHEGNN  360
VFSIGSLCDS GTRIVKQKLV EAMKLLESDE ETTSMQGNLN KVDDQFVRDV LLDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-36	FAR1 family protein