PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g617530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 326aa MW: 35950.8 Da PI: 6.1656 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.3e-10 | 51 | 100 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f eL l ++ +K++Ka+iL+ +++ +k+L Pd.00g617530.m01 51 RKVQKADREKLRRDRLNEHFLELGNTLDPD----RPKNDKATILTDTIQMLKDL 100 5677889********************997....79****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MDQWNGDDFS AASAPSSAQP LLLPSSNRSH NSNSESRQRP DVETKDPIVA RKVQKADREK 60 LRRDRLNEHF LELGNTLDPD RPKNDKATIL TDTIQMLKDL TADVGKLKAE CAALTDESRE 120 LTQEKNELRE EKASLKSDIE NLNVQYQQRL RVMFPWAAMD PSVVMAPQYS YPMPVAVPPG 180 SIPMHPSLQP FPYFQTQTPA AIPNPCSTFV PYQAPANPPV EQPAPQYASV SHLSSKQDSR 240 SKSSDMQRGS NAERCDDSND VATDLELKMP GSSTQQDSSS GGRKAKQSQR KDRVVTDGSS 300 SSRYSSSQGL QDNSSNSVGD VPKSNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 1e-83 | bHLH family protein |