PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g616190.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 405aa MW: 46077.5 Da PI: 6.5176

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g616190.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.3	9.5e-22	90	150	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+lFe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ Pd.00g616190.m01 90 RQRWTPTPVQLQILERLFEQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 150 89***************99************************************97 PP
2	Wus_type_Homeobox	100.7	1e-32	89	152	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+l+++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq Pd.00g616190.m01 89 ARQRWTPTPVQLQILERLFEQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 152 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MEWEKLQQKE HEMDGQANGN GNGGVLYVKV MTDEQLETLR KQIAVYASIC EQLVEMHKNL 60 TAQQDLAGVR MGNLYCDPLM TSAGHKITAR QRWTPTPVQL QILERLFEQG NGTPSKQKIK 120 EITSELSQHG QISETNVYNW FQNRRARSKR KQQNAACNHA ESEVETEVDS PKDKKTRPEE 180 LFQSQQNSAQ RTEDLCFQSP EISSDLHFLD PQTTKTDKMF PSNSGLRTSR HLSEMSFYDE 240 VLSNSRNDLM TGKIEAGNYN LFQQAEDYGM TGFRIAIEVQ SGLRLGGSIR AQLYETLSLG 300 EWWVHQLIQD INIYMILPPS TFSWLSGKII RRFVPMDKIL KPVLLECVTP VTCYWSLSFI 360 VRGEAELVLV FKELRPPMKM LVPIWKALCA ATGIKGGSNT SMEDG

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MEWEKLQQKE HEMDGQANGN GNGGVLYVKV MTDEQLETLR KQIAVYASIC EQLVEMHKNL  60
TAQQDLAGVR MGNLYCDPLM TSAGHKITAR QRWTPTPVQL QILERLFEQG NGTPSKQKIK  120
EITSELSQHG QISETNVYNW FQNRRARSKR KQQNAACNHA ESEVETEVDS PKDKKTRPEE  180
LFQSQQNSAQ RTEDLCFQSP EISSDLHFLD PQTTKTDKMF PSNSGLRTSR HLSEMSFYDE  240
VLSNSRNDLM TGKIEAGNYN LFQQAEDYGM TGFRIAIEVQ SGLRLGGSIR AQLYETLSLG  300
EWWVHQLIQD INIYMILPPS TFSWLSGKII RRFVPMDKIL KPVLLECVTP VTCYWSLSFI  360
VRGEAELVLV FKELRPPMKM LVPIWKALCA ATGIKGGSNT SMEDG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	152	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-94	WOX family protein