PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g615870.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 313aa    MW: 34999 Da    PI: 10.2926
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g615870.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.44.4e-10115144130
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIart 30 
                       r +WT+ E++l++++ +q+G+g+W++I+++
  Pd.00g615870.m01 115 RTPWTKHEHKLFLKGLEQYGKGDWRSISSE 144
                       789************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
METLCFSKGP LCYPSRFSNN LSRLPQPEKP NDDQWTFDEN KRFENALTEL NLDAPYLFQK  60
LRTRVPGKTV AQIKKHFEAL FEDILMIESG HIALPEYNKI STESKVTTKP FRRRRTPWTK  120
HEHKLFLKGL EQYGKGDWRS ISSESINVRQ TYMGFSPAGA QTAPTTTVRG SGSPATPNPG  180
SSRSESRALM EKEKILGKPV LDRVGLIIEI FNAHACTKKG KLQAELAALM YKKTRLVRLR  240
GKSGRSTFGT DGEDEVVSAR GGGSGGRGFI SGAGETELQL QRRRFISMIL ISYVNIYISC  300
SSFNGPLTAS FSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-22MYB family protein