PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g615670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 647aa MW: 73543.4 Da PI: 7.6258 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 95 | 8.8e-30 | 84 | 175 | 2 | 88 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn+YA+++GFs+r+s s++s+r+g i++r fvC +eg+r +++ k + + +r+r+etr+gCka+l++k +++gkw+v+ +++eHnHe Pd.00g615670.m01 84 FYNSYARRTGFSTRVSMSRRSRRDGAIIQRSFVCAREGFRVDKHGKpgsdrEGRVKRPRPETRVGCKAMLVIKIQDSGKWVVSAFVKEHNHE 175 9*****************************************999999988888899**********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 647 aa Download sequence |
MEFEPLSLGN DVIEFDMMGL GDIDHSVDHD DLLHDSPPTG IPTPSVSDVV GSAAIFEPYI 60 PEGDTNLEPY EGMEFESEEA SKAFYNSYAR RTGFSTRVSM SRRSRRDGAI IQRSFVCARE 120 GFRVDKHGKP GSDREGRVKR PRPETRVGCK AMLVIKIQDS GKWVVSAFVK EHNHEPVPPE 180 RVHCLRSHRH VSGPAKSLID TLQGAGIGPR GIMSALVKEY GGIKNIGFTE RDCRNYMRSS 240 RQRTLGGDTQ LLLDYLKDKQ AKDPAFFFAV QGDEDQCMSN VFWADPKART DYTYFGDTVT 300 FDTTYRSNRY RLPFAPFTGV NHHGQPVLFG CALLINESEA SFLWLFKTWL IAMSGRPPLS 360 FTTEHDRVIS LAITQTPSPM EKQAAGLYTR KMFMKFQEEL VETLTFLAMK VEDEEAGSIY 420 QVSKFGESHK AYFVRFNVHE MKAFCSCQRF EFSGLLCAHI LTVFRVTNVL TLPPHYILKR 480 WTRNAKSGVI LEERASDLLN KSQESLTVRY NNLRHEALKY VDEGVKTVEI YNMSMDALEE 540 AANRVSLAKK NDGRLAIVSR AGRDDGFHLG SRSNTFGDHK WGFETLSADE QDKKIQKLER 600 QLDRAQRKCE LYRASLLSVY LNHNKIETRT EEAALCQRHM QTFLSSM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 143 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-158 | FAR1 family protein |