PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g614500.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 217aa MW: 24800.8 Da PI: 7.0325 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.4e-17 | 13 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l Pd.00g614500.m01 13 RGNISADEEDLIVRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 58 7899******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MRWVNYLRPG IKRGNISADE EDLIVRLHKL LGNRWSLIAG RIPGRTDNEI KNYWNTHLSR 60 RSSSDQELLE HHKPSINPKN QHNKKGLIPS DQSHKAKAIR PKHFKCTKVD VGIPSHLQDD 120 QDHQIMVDTT NNINGFSSSS VPAGSSSNDL FILDLLNSTE IQQAQMKEWQ VAMVENYWRG 180 SPIIAAVDPF EPNIDGEVAF NALSSFMNIE DYQYWIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-34 | MYB family protein |