PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g613990.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 357aa MW: 40794.2 Da PI: 5.6945

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g613990.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.2	3.5e-35	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d+e+++++sws+ g+sf+v+d+ ef++++LpkyFkh+nf+SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll Pd.00g613990.m01 18 FLNKTFQVVDDPETNSVVSWSAAGQSFIVWDSYEFSRTLLPKYFKHNNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLL 101 9**************************************************************999.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++ikr+ Pd.00g613990.m01 102 KNIKRRI 108 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MALPKPMEGL HEAGPPPFLN KTFQVVDDPE TNSVVSWSAA GQSFIVWDSY EFSRTLLPKY 60 FKHNNFSSFI RQLNTYGFKK VDPDRWEFAN EGFQGGKKHL LKNIKRRIRY NKQPTVGCVD 120 STKTGLEAEI ESLKKDRDFL KLEIMNLRQQ QKYSQHQLTA IEQRIRNSEC KNQGMLFFLT 180 KTATNSTIVQ QLRQKRVIKR ELDGSDLRKR RRIPSVQVLE SLRDWIDTSL SVDCGSQLEE 240 ELEPMQSLLA EQVAEAKVAK QNEAPLPAPM IDKSGNAVQD LKPHVMAGTG TEDMPTAYHG 300 MSENFLVENV VFDDDEFEVD DSNFYQELED LIGKPHDWSG YVSHCLMEQT GVIGAMP

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MALPKPMEGL HEAGPPPFLN KTFQVVDDPE TNSVVSWSAA GQSFIVWDSY EFSRTLLPKY  60
FKHNNFSSFI RQLNTYGFKK VDPDRWEFAN EGFQGGKKHL LKNIKRRIRY NKQPTVGCVD  120
STKTGLEAEI ESLKKDRDFL KLEIMNLRQQ QKYSQHQLTA IEQRIRNSEC KNQGMLFFLT  180
KTATNSTIVQ QLRQKRVIKR ELDGSDLRKR RRIPSVQVLE SLRDWIDTSL SVDCGSQLEE  240
ELEPMQSLLA EQVAEAKVAK QNEAPLPAPM IDKSGNAVQD LKPHVMAGTG TEDMPTAYHG  300
MSENFLVENV VFDDDEFEVD DSNFYQELED LIGKPHDWSG YVSHCLMEQT GVIGAMP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	107	LKNIKRR
2	208	212	RKRRR
3	209	213	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	8e-83	HSF family protein