PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g613500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 269aa    MW: 29434.1 Da    PI: 9.9969
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g613500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.6e-1359103347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
  Pd.00g613500.m01  59 PWTEEEHRTFLIGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 103
                       8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MSMKKSFSMD CLPTSSASSS SPSSSRISVD ENSIQDKASI GYLSDGLICR AQERKKGVPW  60
TEEEHRTFLI GLEKLGKGDW RGISRNYVTT RTPTQVASHA QKYFLRQATL TKKKRRSSLF  120
DMFGRSNNIN LSTGHPANTN TSHYKQPLSD DHQVLPRQHN NIIHDNSGAT LPLLELGTSV  180
AAQNPNLDNR KPDHCHANQQ LPVWIYGLID SQMKYSSNIA ASKPASSASV VPDLELKLAA  240
PTSPSLEQKN KSSPSPAGPL LNLGPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112116KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-45MYB_related family protein