PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g613460.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HRT-like | ||||||||
Protein Properties | Length: 378aa MW: 41979.7 Da PI: 9.7008 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 58.4 | 1.1e-18 | 269 | 299 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv +dGsvC+++Pv+gRKRC++HKGmRi Pd.00g613460.m01 269 ICGVDVGDGSVCRMPPVPGRKRCAKHKGMRI 299 8*****************************7 PP | |||||||
2 | HRT-like | 55.1 | 1.3e-17 | 343 | 373 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCG+il dGs C r+P++gRKRC eHKG+Ri Pd.00g613460.m01 343 ICGFILADGSSCGRHPIQGRKRCDEHKGKRI 373 8*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MGASDLTVAV TRLKREDCKR TKHDSHFSNW KILVGPSDWE DYSLGKEGAE RYRVHNLPTK 60 ESPGVYELGI AVLRTGLGRE IGKLDPDYIV PVYLGQADNV RTRLQQYGRS GAHLGNGCPT 120 GHPSDRVQKG PGLFAEILSR DYPVVYRWAP MENKSVALKT ETQLLNTFDY AWNTNINGAR 180 RPDDVLQKLK MVSSSTTRFV NIARKLVPFS PKKVGTRIES SELLSPEDKF SACANRESHN 240 PLSRVFKLGR SQPRLVLDRI GITQENTIIC GVDVGDGSVC RMPPVPGRKR CAKHKGMRIN 300 RSTGVGISNS TVDSESECSA ISSIEFHDAQ IINRDPVESF TSICGFILAD GSSCGRHPIQ 360 GRKRCDEHKG KRIKNPYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 5e-90 | HRT-like family protein |