PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g613460.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HRT-like
Protein Properties Length: 378aa    MW: 41979.7 Da    PI: 9.7008
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g613460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like58.41.1e-18269299131
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                       iCGv  +dGsvC+++Pv+gRKRC++HKGmRi
  Pd.00g613460.m01 269 ICGVDVGDGSVCRMPPVPGRKRCAKHKGMRI 299
                       8*****************************7 PP

2HRT-like55.11.3e-17343373131
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                       iCG+il dGs C r+P++gRKRC eHKG+Ri
  Pd.00g613460.m01 343 ICGFILADGSSCGRHPIQGRKRCDEHKGKRI 373
                       8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MGASDLTVAV TRLKREDCKR TKHDSHFSNW KILVGPSDWE DYSLGKEGAE RYRVHNLPTK  60
ESPGVYELGI AVLRTGLGRE IGKLDPDYIV PVYLGQADNV RTRLQQYGRS GAHLGNGCPT  120
GHPSDRVQKG PGLFAEILSR DYPVVYRWAP MENKSVALKT ETQLLNTFDY AWNTNINGAR  180
RPDDVLQKLK MVSSSTTRFV NIARKLVPFS PKKVGTRIES SELLSPEDKF SACANRESHN  240
PLSRVFKLGR SQPRLVLDRI GITQENTIIC GVDVGDGSVC RMPPVPGRKR CAKHKGMRIN  300
RSTGVGISNS TVDSESECSA ISSIEFHDAQ IINRDPVESF TSICGFILAD GSSCGRHPIQ  360
GRKRCDEHKG KRIKNPYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.15e-90HRT-like family protein