PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g611720.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 308aa MW: 35073.2 Da PI: 4.8609 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 107 | 1.4e-33 | 12 | 102 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 F++k+y++++d+++++li+w + +nsf+v+d+ +f++++Lp yFkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+++ll Pd.00g611720.m01 12 FVMKTYQMVNDPTTDKLITWGRANNSFIVVDPLDFSQRLLPAYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQTHLL 95 9********************999*****************************************999.........**************** PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 +++ +++ Pd.00g611720.m01 96 RNVGKHE 102 *998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MMEENNNVIA PFVMKTYQMV NDPTTDKLIT WGRANNSFIV VDPLDFSQRL LPAYFKHNNF 60 SSFVRQLNTY GFRKVDPDRW EFANEWFLRG QTHLLRNVGK HEELDDEEIV MEIARLKQEQ 120 KALEEEMENM NKRLEATERR PQQMMAFLHK VAEDPEILPR IMLEKDRTFR AQLGEKKRRV 180 MMLTSTSSSS SGMGATNSVK TEDEDDGTVG VISSSPEPGF EMESFYSTSP ETSTALEWGR 240 QRRVVDRVRA AQDPYNMNPT ASGHGFGNSS NSGYGYGNRN GGAEVGYLTE EPIPAPPPYP 300 FSLLEGGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24520.1 | 4e-90 | HSF family protein |