PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g610540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 23445.2 Da PI: 7.6045 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.9e-19 | 5 | 50 | 1 | 50 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaar 50 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ Pd.00g610540.m01 5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAA 50 59*******9.**********8.....334*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMNPRGSSS 60 DLDHSLSEPK GLSEILHAKL RKCSKLPSPS MTCLRLDNES SHIGVWQKRA GQRSDNSNWV 120 MTVQLGKKKN SNNTNAADDH GQSISSSSPL IMSTSESSAS TSSARGPELI AEMDEEEKIA 180 LQMIEELLNR NCPSPSNSSF GIQPGEESFY L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-52 | ERF family protein |