PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g606450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 313aa    MW: 35388.9 Da    PI: 4.9457
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g606450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.2e-30128185258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh
  Pd.00g606450.m01 128 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 185
                       79*************************998**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MENWDLQAVV RGCNTTANID EAMENSQIPY CFAPLSIEEE DDFFHALPKL FEATAALDEL  60
EELYKPFYPV LQPSTAPIIL ASSMSVPQEA ITVEVPKKLK ESSKLCKKIR KNQSKRVMKE  120
VRAEDLFSDV WAWRKYGQKP IKGSPYPRSY YRCSSSKGCS ARKQVERSCS NPETFIITYT  180
AEHNHVHPTR RNSLAGSTRS KFPSSKNKDK CKSSLNSPAM TNLAASIEED HDVQSASTNA  240
VKEEAQLLLE EVEISHENVM LDVMLSDEMI PSFEDLDREL EPVMDGWFLD QFSDNFPSPW  300
FNIGHSNTVT GAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.17e-37WRKY family protein