PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g606000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 312aa MW: 33096.4 Da PI: 6.5991 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.2 | 2e-18 | 23 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d ++ r +lg+f+tae+Aa+a++ a+++l+g+ Pd.00g606000.m01 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73 689******.7*********....4456*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MGLRAQNDGV RGRRKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA 60 RAYDDAARAL RGANARTNFE LPQSTNGSGH ANGGAGLAEN VEPFSFEAVC GNGAEADGLL 120 GALRAKLLDG KGCVVPQPQG NNGGSKMEPF PIGPRGVMGF VNPNPPPSSS GSAKEYPIVL 180 DVNGHDHRWG HHQAQPSHTA SNQSMAWSNE SPALAYDQVP NWSTWSTQTD SFTEQCPMEL 240 PLQITSLAGD GKVTAVSSQQ LSQIDGSAIL GSSASGAWSS DQQQFLHCDN SWAAGGANAS 300 WDPLFYASSV LG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 9e-16 | ERF family protein |