PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g606000.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 312aa    MW: 33096.4 Da    PI: 6.5991
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g606000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-182373256
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                      ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Pd.00g606000.m01 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73
                      689******.7*********....4456*************************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGLRAQNDGV RGRRKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDDAARAL RGANARTNFE LPQSTNGSGH ANGGAGLAEN VEPFSFEAVC GNGAEADGLL  120
GALRAKLLDG KGCVVPQPQG NNGGSKMEPF PIGPRGVMGF VNPNPPPSSS GSAKEYPIVL  180
DVNGHDHRWG HHQAQPSHTA SNQSMAWSNE SPALAYDQVP NWSTWSTQTD SFTEQCPMEL  240
PLQITSLAGD GKVTAVSSQQ LSQIDGSAIL GSSASGAWSS DQQQFLHCDN SWAAGGANAS  300
WDPLFYASSV LG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-16ERF family protein