PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g602340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 326aa    MW: 36312.4 Da    PI: 7.0367
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g602340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.93e-4052112262
            zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                       +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ 
  Pd.00g602340.m01  52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVA 112
                       7899******************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGHNSLQVCM DSSDWLQGTM HEDSPMDSSS PLSGDMLTCS RPLIERRLRP QHDQALKCPR  60
CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK VASKKPNEPH  120
NPLMNQNAGS SSSSVSHNPT DLHLSFPDQM QFSHLNGLML GSNNNPSFMD SRYNGMLESN  180
TNNPRPIDFM ESKLEAIVGN ARNYDFMGNG ADLGMMGGLA NNMGGESSFH HGLCSPFGMS  240
SFDGQNGNFM DTCQRLMLPY DHQASHDQDH HQNGMDVKPN TKLLSLEWQD QGCSDHGKES  300
FGYLNGLGSW TNVMNNYGPS TTNPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62940.14e-54Dof family protein