PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g601570.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 298aa MW: 32395.2 Da PI: 8.2861 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.9 | 2.7e-14 | 88 | 132 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky Pd.00g601570.m01 88 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 132 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MAGTCSTVEP AGAGEIMLFG VRVVVDSMRK SVSLNNLSQY EQPQEGSNNN SGNNTIAGKD 60 DVAGYASEND VVHNSAGNRE RERKRGVPWT EEEHKLFLLG LQKVGKGDWR GISRNFVKTR 120 TPTQVASHAQ KYFLRRSNHN RRRRRSSLFD ITTDTVTATP MDEQQVDHQN NTSQSHPLPP 180 PPPSEACNPS GFSMVPNFPL TVGPAVLPVP IENPMGNLTL GHANLENNAS AKLVRPIALH 240 SAPHATAMSD LNLKSTMDTS TLTLNLSLSM DPRESSSRHS AFQAMPSFSN GDSIISVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G74840.1 | 2e-58 | MYB_related family protein |