PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g600010.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 231aa    MW: 25285.4 Da    PI: 8.0531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g600010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.3e-193786255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  Pd.00g600010.m01 37 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAALAYDAAARKLYG 86
                      69****999.**********8...3.35************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSSVKVGERK QVKRPAQASS RKGCMRGKGG PENAMCTYKG VRQRTWGKWV AEIREPNRGA  60
RLWLGTFDTS HEAALAYDAA ARKLYGSEAK LNLPDQLVPH CHHHHQVPSS VNTHMLPQTP  120
NPSAQLTLLH QNPSGTSSAG LSNDYAAPLN DVAVPVLRDH FPNVKAHQPH GMDSGIFWGN  180
ISGNFPMFDD SIWAEAAMSL DFPVIEDHGI FSSNFVDGSG WGPLQPSPWC V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-47ERF family protein