PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g600010.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 25285.4 Da PI: 8.0531 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.3e-19 | 37 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g Pd.00g600010.m01 37 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAALAYDAAARKLYG 86 69****999.**********8...3.35************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MSSVKVGERK QVKRPAQASS RKGCMRGKGG PENAMCTYKG VRQRTWGKWV AEIREPNRGA 60 RLWLGTFDTS HEAALAYDAA ARKLYGSEAK LNLPDQLVPH CHHHHQVPSS VNTHMLPQTP 120 NPSAQLTLLH QNPSGTSSAG LSNDYAAPLN DVAVPVLRDH FPNVKAHQPH GMDSGIFWGN 180 ISGNFPMFDD SIWAEAAMSL DFPVIEDHGI FSSNFVDGSG WGPLQPSPWC V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 2e-47 | ERF family protein |