PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g598950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 383aa MW: 42514.5 Da PI: 6.9036

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g598950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.8	8.8e-19	11	117	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 + F+ tdeel L k ++g++l+ +vi++++ y++ P++Lp + wyf +++++k t+ gyW+++g+ +++s + Pd.00g598950.m01 11 DIGFQCTDEELC-ISLGKIISGSPLPG-NVIEDANPYQLVPSNLP------DGFWYFIHSNENK---------PTNFGYWRTKGEACRIFS-N 85 56799****9.66*******9.99**********9......3568888887654.........4778**********.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g + tL fy+g+ p+ +ktdWvm+ey l Pd.00g598950.m01 86 SSITGWRATLEFYQGQPPHESKTDWVMQEYWL 117 99**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MRPQSASLPA DIGFQCTDEE LCISLGKIIS GSPLPGNVIE DANPYQLVPS NLPDGFWYFI 60 HSNENKPTNF GYWRTKGEAC RIFSNSSITG WRATLEFYQG QPPHESKTDW VMQEYWLTQK 120 KLSEDSKAKE PRSLCRVFCS NEQKSNCKNL QKMVSSDSAS YSTHSAVPRA ENCTSHSSTS 180 KPQVIKDNER GTLIVTERVP DHNVQIMPEV DYVSRGDYLE LLDLDTPASF SFSSDSSCLT 240 MSSDECFDSL ALLEELEPKN SQDLVNKNAG CKFSISAPPR PDELVMFAAS SGSFSKSPSE 300 ERVKTHSPIL PGSAVCGKIS GKTSNNMSRI QKPDNRNEGG PSTSHNVDVS PSSHTASQEG 360 KRRARTIGRT EKLKKKYFCF MPF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MRPQSASLPA DIGFQCTDEE LCISLGKIIS GSPLPGNVIE DANPYQLVPS NLPDGFWYFI  60
HSNENKPTNF GYWRTKGEAC RIFSNSSITG WRATLEFYQG QPPHESKTDW VMQEYWLTQK  120
KLSEDSKAKE PRSLCRVFCS NEQKSNCKNL QKMVSSDSAS YSTHSAVPRA ENCTSHSSTS  180
KPQVIKDNER GTLIVTERVP DHNVQIMPEV DYVSRGDYLE LLDLDTPASF SFSSDSSCLT  240
MSSDECFDSL ALLEELEPKN SQDLVNKNAG CKFSISAPPR PDELVMFAAS SGSFSKSPSE  300
ERVKTHSPIL PGSAVCGKIS GKTSNNMSRI QKPDNRNEGG PSTSHNVDVS PSSHTASQEG  360
KRRARTIGRT EKLKKKYFCF MPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-20	NAC family protein