PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g598530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 225aa    MW: 24197.7 Da    PI: 6.336
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g598530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.92.2e-383392362
            zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      ++ l+cprCdstntkfCyynny+l+qPr+fCk+CrryWt+GG+lr+vPvGgg+rkn k+s
  Pd.00g598530.m01 33 TDPLHCPRCDSTNTKFCYYNNYNLAQPRHFCKSCRRYWTQGGTLRDVPVGGGSRKNSKRS 92
                      56789***************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MPFESEDNNQ KPPSTTTTTK VQQSMGQQPL PQTDPLHCPR CDSTNTKFCY YNNYNLAQPR  60
HFCKSCRRYW TQGGTLRDVP VGGGSRKNSK RSRSTTCSSS SCSPSSSSLT QEVTSVATAK  120
PVSLSAEVKP EPASDVDHLM DLNENVVGNG VGDAFGHGGK GVWAFPEVGD FPSTVIDHNN  180
NNGAPSGCNT WQMTTSADGG FVDGDCFAWP ELEISMMPAS GKAFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47655.11e-31Dof family protein