PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g598080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 303aa    MW: 34135.9 Da    PI: 7.3738
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g598080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.29.1e-191461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WTteEd llvd+++++G+g+W+  ++  g+ R++k+c++rw +yl
  Pd.00g598080.m01 14 KGPWTTEEDALLVDYIQKHGTGNWRNLPKNAGLERCGKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding48.71.8e-1567111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rgr++ eE+e +++++  lG++ W++Ia++++ gRt++++k+ w+++
  Pd.00g598080.m01  67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNCWNTH 111
                       89********************.*********.***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGRAPCCDKN GLKKGPWTTE EDALLVDYIQ KHGTGNWRNL PKNAGLERCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNCWNT HIRKRLLKMG  120
IDPVTHAPRI DLLDLSSILS SYMCNNPAAA LLNLSSLLSS TQQQQPLVNP EMLRLATNLL  180
SIKQENPELC SQNYNLHDQN QLCNSQQQNS QVLPPLQSHD QLQDLIQEDF SADVAKMKQL  240
MQVINEEGYS PNMTNFNCPK VSQENMIPSN LGADHQTAVC QPSYVPCTTS SVLKVGENII  300
VLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-88MYB family protein