PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g598070.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 370aa MW: 41762.9 Da PI: 4.8003

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g598070.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd llvd+++++G+g+W+ ++ g+ R++k+c++rw +yl Pd.00g598070.m01 14 KGPWTTEEDALLVDYIQKHGTGNWRNLPKNAGLERCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.8e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ Pd.00g598070.m01 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRAPCCDKN GLKKGPWTTE EDALLVDYIQ KHGTGNWRNL PKNAGLERCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKMG 120 IDPVTHAPRI DLLDLSSILS SYMCNNPAAA LLNLSSLLSS STQQQQPLVN PELLRLATNL 180 LSIKQENPEL CSQNYNLLDQ DQLCNSQQQN SQVLPPLQSH DQLQDLIQED FSADVAKMKQ 240 LMQVINEEGY SPNMTNFKCP TVSQENMVPS NLGADHQTAV CQPSYVPCTT SSDPTIIPDL 300 PENYFQSLNY NRSSDFSFDS VMSTPYSSPT ALNSLGTYIN SSTEDEKESY CSDWLKFEIP 360 ESALDINDIM

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRAPCCDKN GLKKGPWTTE EDALLVDYIQ KHGTGNWRNL PKNAGLERCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLKMG  120
IDPVTHAPRI DLLDLSSILS SYMCNNPAAA LLNLSSLLSS STQQQQPLVN PELLRLATNL  180
LSIKQENPEL CSQNYNLLDQ DQLCNSQQQN SQVLPPLQSH DQLQDLIQED FSADVAKMKQ  240
LMQVINEEGY SPNMTNFKCP TVSQENMVPS NLGADHQTAV CQPSYVPCTT SSDPTIIPDL  300
PENYFQSLNY NRSSDFSFDS VMSTPYSSPT ALNSLGTYIN SSTEDEKESY CSDWLKFEIP  360
ESALDINDIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	6e-98	MYB family protein