PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g597400.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | DBB | ||||||||
Protein Properties | Length: 208aa MW: 22821.9 Da PI: 6.3346 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 21 | 6.8e-07 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e ++ fC ++ lC++C ++ H Pd.00g597400.m02 4 LCDVCEGAAAIVFCAADEAALCRSCDEKVH 33 7******99******************998 PP | |||||||
2 | zf-B_box | 27.5 | 6.6e-09 | 52 | 92 | 2 | 38 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 + ++C+ +e+ ++ ++Ce +++ lC +C + H g H+ Pd.00g597400.m02 52 DVPCCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtHR 92 5789**************************99966666776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MRTLCDVCEG AAAIVFCAAD EAALCRSCDE KVHMCNKLAS RHVRVGLASP SDVPCCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HRRYLLFRQR VEFPGDKPGR SEELGLQPLD 120 QKEVRKDHIQ PPSLSIRGNQ QNCSASPVAV LDNNIVGDFK MDNRLIDLNT RPQRMNGQAS 180 TSPEQGLDVQ NGVNDESASV VPVGSFKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-83 | DBB family protein |