PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g596510.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 464aa MW: 52797.4 Da PI: 4.8301

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g596510.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.3	3e-07	321	364	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++ a++q G++ ++ I + gRt+ q+k+++ k Pd.00g596510.m01 321 VRWSKQDTELFYGAIQQCGSD-FTMIQELYFPGRTRHQIKLKFKK 364 69*****************.*98766********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MLSQAVLVPS EIDMNESSLP AFPPGHVVDH PSPRFGDSSN PHPTSDPLVN TEYIAETIHS 60 DGAIFGDAVH SEDVGGTPGK EGHKSRNRKG STASNRSQKR KSFAASEEAE GGTSSRKLRK 120 RLPRQEVEEL VHEANEDSFT AEPSSGSNVN EDENNDNEYR EHKTSQRKRA PRKSKEPESG 180 KEEPVQKRKR AKEAPDKSTK DPPKRFSHST RRTKRHVDKS LLEIPEDEID HQSLSLKNLI 240 RLAEHRELLA IKEARKMTTP VPDESANNDS HKEAYHNEEN EEETFPSEQD RNSEENQASY 300 RVNASSFLLN YQSYMDKTPT VRWSKQDTEL FYGAIQQCGS DFTMIQELYF PGRTRHQIKL 360 KFKKEERQNP LRINEAVLSR STCSTDHSQF TSYIERLQQV AQANKEEEAE PTHDTDEGVK 420 KTELEEPEDQ EADVAEVQEE AVDAEVDNPL KSDEIDDEEF TWSE

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MLSQAVLVPS EIDMNESSLP AFPPGHVVDH PSPRFGDSSN PHPTSDPLVN TEYIAETIHS  60
DGAIFGDAVH SEDVGGTPGK EGHKSRNRKG STASNRSQKR KSFAASEEAE GGTSSRKLRK  120
RLPRQEVEEL VHEANEDSFT AEPSSGSNVN EDENNDNEYR EHKTSQRKRA PRKSKEPESG  180
KEEPVQKRKR AKEAPDKSTK DPPKRFSHST RRTKRHVDKS LLEIPEDEID HQSLSLKNLI  240
RLAEHRELLA IKEARKMTTP VPDESANNDS HKEAYHNEEN EEETFPSEQD RNSEENQASY  300
RVNASSFLLN YQSYMDKTPT VRWSKQDTEL FYGAIQQCGS DFTMIQELYF PGRTRHQIKL  360
KFKKEERQNP LRINEAVLSR STCSTDHSQF TSYIERLQQV AQANKEEEAE PTHDTDEGVK  420
KTELEEPEDQ EADVAEVQEE AVDAEVDNPL KSDEIDDEEF TWSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	8e-44	MYB_related family protein