PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g596150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 418aa MW: 46029.8 Da PI: 6.1823

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g596150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.4e-10	227	274	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Pd.00g596150.m01 227 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 274 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MNRASPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHQ HEHNDPIQLH QQQQGYNFSG 60 NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAEFE 120 EMINGHNNNS NISRTFSCPP TVAAEKKSTD AVLSQKISSP PGKESFKKRK ADKVQSNKAV 180 AAEDDSTEKR MKGESSGDTS KDNSKVSDVQ KPDYIHVRAR RGQATDSHSL AERVRREKIS 240 ERMKYLQDLV PGCNKITGKA GMLDEIINYV QSLQRQVEFL SMKLAAVNPR LDFNIDDLFA 300 KEMFPACAAN FQTIGMSSEM TNSAYVQFNP VQQMVSSCGL DMGINSSDLA LRRAISAPVS 360 IPETFIDTSC FTQAPPTAIW DADLQNLFNV ELQQGRTTPF QSQPFTGSIE ASNLKMEM

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MNRASPEMLN CMNAPGTFLA GNCTDMTVLE RQRARMKWHQ HEHNDPIQLH QQQQGYNFSG  60
NELSGVFSVP IPAGQAQGFM GLVCGDSAVK PDPCSENRWA ELGYGSCGLV VNNNGAAEFE  120
EMINGHNNNS NISRTFSCPP TVAAEKKSTD AVLSQKISSP PGKESFKKRK ADKVQSNKAV  180
AAEDDSTEKR MKGESSGDTS KDNSKVSDVQ KPDYIHVRAR RGQATDSHSL AERVRREKIS  240
ERMKYLQDLV PGCNKITGKA GMLDEIINYV QSLQRQVEFL SMKLAAVNPR LDFNIDDLFA  300
KEMFPACAAN FQTIGMSSEM TNSAYVQFNP VQQMVSSCGL DMGINSSDLA LRRAISAPVS  360
IPETFIDTSC FTQAPPTAIW DADLQNLFNV ELQQGRTTPF QSQPFTGSIE ASNLKMEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	8e-66	bHLH family protein