PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g595100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 495aa MW: 56802.1 Da PI: 7.9769

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g595100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.8	4.1e-19	42	125	4	90
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 n+YA + GFs+rk + ++ ++n+ + +r+f Cskeg++ +e+ e ++ +r trtgCka ++ + e +g w+++ ++ HnHe+a Pd.00g595100.m01 42 NTYAFNKGFSIRKGHLRRDSQNN-VRQREFLCSKEGFQVDEDLC-EAKKVRRLDTRTGCKAVIRFTVE-NGMWKLSYINPVHNHEFA 125 89**************97766.************9998.99999*************9.*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MDSDFQSKSL EKSDKEALFG ESDELRVGME VSDESEAYQL CNTYAFNKGF SIRKGHLRRD 60 SQNNVRQREF LCSKEGFQVD EDLCEAKKVR RLDTRTGCKA VIRFTVENGM WKLSYINPVH 120 NHEFAKPEER QFLRSGRNIP SVRANILGSK SDGSIRPAKS HSYLGKEFGS DENDGSTNKD 180 LPNCLQRKFQ NSWDDMIKMF NLESNSWLKM LYSLREKWCP AFSLDTFSEN IGSSQRGENT 240 NTIFHQVSRK TVDLVSFVQH YEQKTKKMRF RELEEDFRCK NAMPHLRVNS GIFKHAATEY 300 TVKMYSFFEN ELMSIFGVRM VEVGNDGNQY IYEAIEEGHQ RVYMIQYNST TSMISCSCKL 360 FESMGLLCRH ALKVLDFKNY TSIPTQYIVK RWTKGAKKGI VVSNEFCKSS YRKAKSAQSL 420 RLSELMHEGN NVFSIGSLCD SGTRIVRQKL AETIKLLESD EETTNMLGSL SKVDDQSVRD 480 VLLDNGSVES SSCDG

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MDSDFQSKSL EKSDKEALFG ESDELRVGME VSDESEAYQL CNTYAFNKGF SIRKGHLRRD  60
SQNNVRQREF LCSKEGFQVD EDLCEAKKVR RLDTRTGCKA VIRFTVENGM WKLSYINPVH  120
NHEFAKPEER QFLRSGRNIP SVRANILGSK SDGSIRPAKS HSYLGKEFGS DENDGSTNKD  180
LPNCLQRKFQ NSWDDMIKMF NLESNSWLKM LYSLREKWCP AFSLDTFSEN IGSSQRGENT  240
NTIFHQVSRK TVDLVSFVQH YEQKTKKMRF RELEEDFRCK NAMPHLRVNS GIFKHAATEY  300
TVKMYSFFEN ELMSIFGVRM VEVGNDGNQY IYEAIEEGHQ RVYMIQYNST TSMISCSCKL  360
FESMGLLCRH ALKVLDFKNY TSIPTQYIVK RWTKGAKKGI VVSNEFCKSS YRKAKSAQSL  420
RLSELMHEGN NVFSIGSLCD SGTRIVRQKL AETIKLLESD EETTNMLGSL SKVDDQSVRD  480
VLLDNGSVES SSCDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-35	FAR1 family protein