PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g594420.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 472aa MW: 51841.8 Da PI: 6.9399

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g594420.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	76.5	3.2e-24	160	216	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ + v+ei+Y+++H+he Pd.00g594420.m01 160 SDGYNWRKYGQKQVKSPQGSRSYYRCTYSECYAKK-IECCDHSGYVTEIVYKSQHTHE 216 7******************************98.*******************8 PP
2	WRKY	97.7	7.5e-31	335	391	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+ Pd.00g594420.m01 335 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAIDNTSAVIITYKGIHDHD 391 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MAEHESFDAL QLGDLQNSAP ESRETQLETL AVPSTLELSE NDQCAGFQVN STSQSIDGAQ 60 LQEQLGVSHQ EILAIVTHQD SQMQTQSPVQ LAVYPTPLSE LSPTSVTQSI QTQTQSPLQL 120 TVYPTPLSEL SPTSVTQSIS SAPSPILLEQ KLPPEKTSAS DGYNWRKYGQ KQVKSPQGSR 180 SYYRCTYSEC YAKKIECCDH SGYVTEIVYK SQHTHEPPRK SNCTKESKLA LSAECVRNSV 240 TEHPCRTVND SEVSTSSKER IQETPSIPER KRQSPSDSDG NGDVKIKEEH GDGDEPEPKR 300 RVKKSNLEYS TSLLKPGKKP KFVVHAAGDV GISGDGYRWR KYGQKMVKGN PHPRNYYRCT 360 SAGCPVRKHI ETAIDNTSAV IITYKGIHDH DMPVPKKRHG PPSAPLVAAA APASMNNLHI 420 KKTDTHQNQI SSTQWSVDTG GELTGEALDL GGEKAMESAR TLLSIGFEIK PC

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MAEHESFDAL QLGDLQNSAP ESRETQLETL AVPSTLELSE NDQCAGFQVN STSQSIDGAQ  60
LQEQLGVSHQ EILAIVTHQD SQMQTQSPVQ LAVYPTPLSE LSPTSVTQSI QTQTQSPLQL  120
TVYPTPLSEL SPTSVTQSIS SAPSPILLEQ KLPPEKTSAS DGYNWRKYGQ KQVKSPQGSR  180
SYYRCTYSEC YAKKIECCDH SGYVTEIVYK SQHTHEPPRK SNCTKESKLA LSAECVRNSV  240
TEHPCRTVND SEVSTSSKER IQETPSIPER KRQSPSDSDG NGDVKIKEEH GDGDEPEPKR  300
RVKKSNLEYS TSLLKPGKKP KFVVHAAGDV GISGDGYRWR KYGQKMVKGN PHPRNYYRCT  360
SAGCPVRKHI ETAIDNTSAV IITYKGIHDH DMPVPKKRHG PPSAPLVAAA APASMNNLHI  420
KKTDTHQNQI SSTQWSVDTG GELTGEALDL GGEKAMESAR TLLSIGFEIK PC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-122	WRKY family protein