PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g588020.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 200aa MW: 22319.1 Da PI: 4.7584 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.2 | 5.5e-15 | 43 | 93 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 ykGVr+ + g+Wv+e+r+p k+ r++lg+f +++Aa+a++ a+++l+ge Pd.00g588020.m01 43 IYKGVRQ--RCGKWVCELRHP---DqKKSRIWLGTFTCPDMAARAYDVAALALKGE 93 69***86..47*********9...3357*************************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MTDFTDDASS SSNRVSAQAH LQSVEFKKRK AGRKKFNETR HPIYKGVRQR CGKWVCELRH 60 PDQKKSRIWL GTFTCPDMAA RAYDVAALAL KGESAALNFP HEASTLPRIA STCSVKDLQC 120 AAAEAADGFF EVEVKASGLE EKGEEQVVYL DEEELFNMPG LIDSMAEGLI LTPPAMQKGF 180 NWNDFDDDME NAVDFSLWSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51990.1 | 4e-43 | ERF family protein |