PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g586800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 262aa    MW: 29778.1 Da    PI: 6.3591
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g586800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.3e-171260148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl
  Pd.00g586800.m01 12 KGPWSPEEDAKLKEYIEKYGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 60
                      79*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MIEIREPANV KKGPWSPEED AKLKEYIEKY GTGGNWIALP QKAGLRRCGK SCRLRWLNYL  60
RPNIKHGEFS DEEDRIICNL FTNIGSRWSI IAAQGSNNST AYYAQTRSFS SALEPISFSP  120
SLLSRSSTNA ASVLHQVHQE RFVGRAMQHN YQVKDNILMF GGEASCSSSD GSCSNQISQC  180
RDREYEYNYN FFNGGEGHQK IMLPDGLNGW RSEKQNGNGI WEDQAPLDYG LEEIKQLISS  240
TSSCNNFLFD ENKTEEKAMM YY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65790.13e-52MYB family protein