PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g586470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 252aa MW: 26975.1 Da PI: 6.1586 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 52.1 | 1.2e-16 | 160 | 206 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq Pd.00g586470.m01 160 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 206 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MGDTYDHYYK NATCSSSPSA SVSPAAAPAQ PPSTSDEISL FLQQILLRSS SSLASVVAHT 60 GKAPQFLFSS SPSVAAVPDH LSRPCHSMFL GDGITAVDSS AALLPAGNPN VSSSSFGASE 120 NETDEYDCES EEGLEALVEE ATGKPGCGRS SSKRSRAAEV HNMSEKRRRS RINEKMKALQ 180 NLIPNSNKTD KASMLDEAIE YLKQLQLQVQ HVNALGSNIR AKRDIVAKFL AAPPFKKFLD 240 AVSHDSLCSD EI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36930.1 | 1e-30 | bHLH family protein |