PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g586260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 247aa    MW: 27249.3 Da    PI: 6.724
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g586260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.97.8e-21137187255
               AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp   + +  r++lg+f+ta eAaka++ a+ kl+g
  Pd.00g586260.m01 137 HYRGVRRRP-WGKYAAEIRDP---NrRGSRVWLGTFDTAIEAAKAYDLAAFKLRG 187
                       7********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MATEHEETSA LELIRQHLLN EFTSMDSFIS GLHLCTSQIP QPQSSHLPSQ SKTNSTTSSD  60
QYFRISDFLL PEIDQDTQFE TKPQIAHPKP PKHSTLSHRK PAINVAIPSP PVLSGDEPQN  120
PSSSNNVVVE ASETARHYRG VRRRPWGKYA AEIRDPNRRG SRVWLGTFDT AIEAAKAYDL  180
AAFKLRGSKA ILNFPLEAGK TAEAEQPLQT TDRRLGERSA ASQQVDDGSV CPVAVTVGDL  240
SNFSSTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.18e-41ERF family protein