PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g586210.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 311aa    MW: 33558.9 Da    PI: 9.9242
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g586210.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-1099135339
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 
                       +WT+eE+  ++ + k+lG+g+W+ Iar + ++Rt+ q
  Pd.00g586210.m01  99 PWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQ 135
                       8*****************************99*9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MRKCSHCGHN GHNSRTCNNN GHGHGQNKGV CLKLFGVNIM EKEDDSMKKS YSMGNLQAAG  60
NADHNNNVVT IDHDAGYLSD GLIHNKKHKA AHERKKGRPW TEEEHRVFLA GLKKLGKGDW  120
RGIARNFVTT RTPTQDQGHQ DSPISPKRTA TETSSEGSSS KVLPQKINTA ISSPPKASVP  180
SQILNRFPHL CLDSPPAAPV SPPCNVPNYP AVSYMMGIPE NVPYAPMMHF ARPSYHYMIK  240
THGNFATCAP VISHPSGIPS PRSLPSSPSM AGRIGMSSPA EKDALELKIG QPQPSQGANL  300
SSPTSGAIRV T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.17e-46MYB_related family protein