PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g585470.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 347aa MW: 38214.5 Da PI: 6.1798 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92 | 4.5e-29 | 170 | 230 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqKe+ gs+fpr+YYrCt++ +Cp+kk+v+r ++dp ++e++Y+geH+++ Pd.00g585470.m01 170 EDGFTWRKYGQKEIMGSRFPRGYYRCTHQklyNCPAKKQVQRLNNDPLTFEVMYRGEHTCH 230 7****************************999***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence |
MDENTISLIL QACSLARDLE SNLPNLANQP NLLSNSLDEI TKKFVTARDR VHGQDPSPSS 60 SLHNMLTLAH QQQIGTSHVQ EWLRSSYAQQ AMDIFQTQLV ADQKEAKIGG CIDDDDAEVK 120 GLQAMDMVSA SDTNIASSSS QRPRRRKDQG LISKITVPAP RIGNTEIPPE DGFTWRKYGQ 180 KEIMGSRFPR GYYRCTHQKL YNCPAKKQVQ RLNNDPLTFE VMYRGEHTCH MSATAPSIPP 240 PSAEHHNATQ ESMAQTLATT TTTDPPITSL WLSMDFNPIR GGGGSSSRIG GGDGVGTSTT 300 TRYGKEVDFP VVDLADAMFN SGSSSSNSMD FIFHSAENKW DSEDKKN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 143 | 147 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 2e-48 | WRKY family protein |