PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g584370.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 654aa MW: 71256.1 Da PI: 8.3838 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 443 | 492 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aa+a+++a+ l+g Pd.00g584370.m01 443 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFATAEDAARAYDRAAIILYG 492 59****999.**********954...5*********************988876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 654 aa Download sequence |
MAGSVRVKEA VVVAPSEPTP TCVLNLSAID SQLFLRFTIE YLLVYAPRPV LNQEATTTRV 60 KSALAKALVP YYPLAGRVRP KADGSSLEVV CRAQGAVFIE AVSDRATLSD FERAPRYVAQ 120 WRKLLSLQVA DVLKGAPPLV VQLTWLKDGA AALGVGFNHC LCDGIGSAEF LNSFAELAAG 180 KPGFANEFKP NPVWDRHLLD PQPVNHVMPR HRIPNAASHP EFNKVPDRCG FMNRFSNERL 240 IPTSITFENI YLRELKKLAL STSRLSTESA YTSFEVLSAH VWRSWARALN LASNQILKLL 300 FSVNVRNRVK PSLPGGYYGN AFVLGCAQSS VKDLEEKGLG HAAGLVKLAK ERVGEEHVRR 360 VVESVSESKA SPDTVGVLIV SQWSRLGLER VDFGMGRPVH VGPILSDRYC LFLPVGLISP 420 NAEIEHAQPE DTGKGGPDNN KFRYRGVRQR SWGKWVAEIR EPRKRTRKWL GTFATAEDAA 480 RAYDRAAIIL YGSRAQLNLQ PSGFGLTLPF PSPAHPVPLM ASGFVPYGVG VGVYPSVAAA 540 ATSSYPVSDG GGGDTSTSYL NPNPSRDQYQ ELLHHNQNNQ ADSCSFNDGN SIMGSGLSLS 600 SSQPMPVAPG CSDPMSGVGP MSPLMWPLTS EEECAPSLWD YGDPFFLDFK GFDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40220.1 | 4e-28 | ERF family protein |