PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g583700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 290aa    MW: 32904.7 Da    PI: 6.9718
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g583700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53e-082469346
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                       WT+eE +++  a +++  +   +W ++a++++ g+t  +++  +q 
  Pd.00g583700.m01 24 EWTKEENKKFESALAMFDEKtpdRWLKVASMIP-GKTVIDVIKQYQE 69
                      7********************************.*********9996 PP
2Myb_DNA-binding38.33.1e-12124168347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++ +  ++G+g+W+ I+r +   +t+ q+ s+ qky
  Pd.00g583700.m01 124 PWTEEEHRRFLMGLLKYGKGDWRNISRNFVISKTPTQVASHAQKY 168
                       7*****************************789***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
METLYPASYM ADSNWFIQDS QSSEWTKEEN KKFESALAMF DEKTPDRWLK VASMIPGKTV  60
IDVIKQYQEL EEDVSEIESG RFPIPGYLTS SFTLDLGDDR NFDANRKRPS AARGSDQERK  120
KGIPWTEEEH RRFLMGLLKY GKGDWRNISR NFVISKTPTQ VASHAQKYFM RQHSGGKDKR  180
RPSIHDITTV NLTSTTPSEN NRPPLDQSPP EQKSTESPKA LLDWNACDDG GAMVFGSTHG  240
SLFESSPYDV AAEGIKLQLQ KLYSSANFAA HAKPQNSMYL MQTSRHQIHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-95MYB family protein