PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g583650.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 362aa MW: 40217.4 Da PI: 10.2369 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.7 | 8.2e-11 | 63 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G g W+tI R+ ++k++w++ Pd.00g583650.m02 63 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 113 79***********************************88**********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MNWQSALEFE FHSFSVIFSD PDLPICIANS FHGFDVNLLR VQNLTGQISF WKIFGFWLMG 60 APKQKWTAEE EAALKAGVLK HGAGKWRTIL TDPEFNSILH LRSNVDLKDK WRNINVTAIW 120 GSRQKAKLAL KRNLPNPKHD NNPLAVSTVI QSHEEIVDAK PLAISGGKLQ TTESKQPIAR 180 LDHLILKAIT NLKELGGSDR ASIAMYIEAQ RLEMSMKCLM MKENHTKKKR LKGVYTQPSN 240 AQGLSAGKKK GRGKAKGGKG KGMLIEIYKG SIVTKEAARA SRLWLHQLRA VGGAHELLHL 300 STALFFSPSS FPEFLYLRSS EGLDLPKLML FLGYGLTGDG SDLSGDPSIS MDWEGSWSSF 360 AD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 227 | 254 | KKKRLKGVYTQPSNAQGLSAGKKKGRGK |
2 | 227 | 256 | KKKRLKGVYTQPSNAQGLSAGKKKGRGKAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67580.1 | 6e-54 | MYB_related family protein |