PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g583650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 352aa    MW: 39171.3 Da    PI: 10.2738
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g583650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.87.9e-1163113146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 
                       +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
  Pd.00g583650.m01  63 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 113
                       79***********************************88**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MNWQSALEFE FHSFSVIFSD PDLPICIANS FHGFDVNLLR VQNLTGQISF WKIFGFWLMG  60
APKQKWTAEE EAALKAGVLK HGAGKWRTIL TDPEFNSILH LRSNVDLKDK WRNINVTAIW  120
GSRQKAKLAL KRNLPNPKHD NNPLAVSTVI QSHEEIVDAK PLAISGGKLQ TTESKQPIAR  180
LDHLILKAIT NLKELGGSDR ASIAMYIEAQ RLEMSMKCLM MKENHTKKKR LKGLSAGKKK  240
GRGKAKGGKG KGMLIEIYKG SIVTKEAARA SRLWLHQLRA VGGAHELLHL STALFFSPSS  300
FPEFLYLRSS EGLDLPKLML FLGYGLTGDG SDLSGDPSIS MDWEGSWSSF AD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.14e-54MYB_related family protein