PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g582980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 569aa MW: 63703 Da PI: 8.0071

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g582980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	377	421	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + Er+RR+++N++f++L++llP+ +K +Ka++L+ A eY+ sL Pd.00g582980.m01 377 HMISERKRREKLNESFHTLKSLLPPG-----TKKDKASVLTTAREYLTSL 421 8899******************97.....8*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MDTAFQLDEG SRASFLRLIM QSFGCFYICL WSYMPPPSNC LFFLDGVYDE ENQPSSSSGN 60 QARRLFDEYR QSIFNVVENE CVPGFAFRNS LPILELQEID LQRLASSSVQ RQFYQEARIK 120 TAVFMGCKSG EIELGLSNVP QINITREQMR NWLPEAFSRQ LSPHTAVANR PNNPDQQNPL 180 SSSSSSFRSL STMDSPEYSS ILFNIPTTTT TSHINIPEVF TQPAPNPLQP INIVTSLEPM 240 PPLNIISSSI TSPHQQALQA SSRIRNTQFP NPEIEDAVMT RAILAVLSAS PSSSSSHQPP 300 PQTNVPPSSS TAHFLTPNTS AFKTYNSSPL APRTPKSANV RKQIMLKRSI SFLRSLNLMR 360 LREGIQATRP TSSQLHHMIS ERKRREKLNE SFHTLKSLLP PGTKKDKASV LTTAREYLTS 420 LRAQVAELSK RNQQLEARLP PAAKEAYNEE AAAAAGSSNE RVSVTLTRVV SESTPDQDQQ 480 IFDLQVVLRS VECCTEDMVI RILEFLKRVN NVSLMSMEAN TWMSGSDSNV NRVILRLRVD 540 QGTEWDEAAF QEAVRRVVAD LALNNCRNQ

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MDTAFQLDEG SRASFLRLIM QSFGCFYICL WSYMPPPSNC LFFLDGVYDE ENQPSSSSGN  60
QARRLFDEYR QSIFNVVENE CVPGFAFRNS LPILELQEID LQRLASSSVQ RQFYQEARIK  120
TAVFMGCKSG EIELGLSNVP QINITREQMR NWLPEAFSRQ LSPHTAVANR PNNPDQQNPL  180
SSSSSSFRSL STMDSPEYSS ILFNIPTTTT TSHINIPEVF TQPAPNPLQP INIVTSLEPM  240
PPLNIISSSI TSPHQQALQA SSRIRNTQFP NPEIEDAVMT RAILAVLSAS PSSSSSHQPP  300
PQTNVPPSSS TAHFLTPNTS AFKTYNSSPL APRTPKSANV RKQIMLKRSI SFLRSLNLMR  360
LREGIQATRP TSSQLHHMIS ERKRREKLNE SFHTLKSLLP PGTKKDKASV LTTAREYLTS  420
LRAQVAELSK RNQQLEARLP PAAKEAYNEE AAAAAGSSNE RVSVTLTRVV SESTPDQDQQ  480
IFDLQVVLRS VECCTEDMVI RILEFLKRVN NVSLMSMEAN TWMSGSDSNV NRVILRLRVD  540
QGTEWDEAAF QEAVRRVVAD LALNNCRNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	386	ERKRRE
2	382	387	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-70	bHLH family protein