PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g582920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 348aa MW: 39836.9 Da PI: 5.3215

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g582920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.3	3.3e-35	12	102	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k++++++d+e+++++sws+ g+sf+v+d+ ef++++LpkyFkh+nf+SF+RQLn+YgFkkv+ ++ weF+++ F+ gkk+ll Pd.00g582920.m01 12 FLNKTFQVVDDPETNSVVSWSAAGQSFIVWDSYEFSRTLLPKYFKHNNFSSFIRQLNTYGFKKVDPDR---------WEFANEGFQGGKKHLL 95 9**************************************************************999.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++ikr+ Pd.00g582920.m01 96 KNIKRRI 102 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEGLHEAGPP PFLNKTFQVV DDPETNSVVS WSAAGQSFIV WDSYEFSRTL LPKYFKHNNF 60 SSFIRQLNTY GFKKVDPDRW EFANEGFQGG KKHLLKNIKR RIRYNKQPTV GCVDSTKTGL 120 EAEIESLKKD QDFLKLEIMN LRQQQKYSQH QLTAIEQRIR SSECKNQRML FFLTKTATNS 180 TIVQQLMQKR VIKRELDGSD LRKRRRLPSV QVLESSSDWI DTSLSVDCGS QLEEELVPMQ 240 SVLAEQVAEA KVAKQNEAPL PAPMIDKAVQ DFKPHVMAGT GTEDMPTAYH GMSENFLEEN 300 VVFDDDEFEV DDSNFYQELE DLIGKPHDWS GYVSHCLREQ AGVIGAMP

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEGLHEAGPP PFLNKTFQVV DDPETNSVVS WSAAGQSFIV WDSYEFSRTL LPKYFKHNNF  60
SSFIRQLNTY GFKKVDPDRW EFANEGFQGG KKHLLKNIKR RIRYNKQPTV GCVDSTKTGL  120
EAEIESLKKD QDFLKLEIMN LRQQQKYSQH QLTAIEQRIR SSECKNQRML FFLTKTATNS  180
TIVQQLMQKR VIKRELDGSD LRKRRRLPSV QVLESSSDWI DTSLSVDCGS QLEEELVPMQ  240
SVLAEQVAEA KVAKQNEAPL PAPMIDKAVQ DFKPHVMAGT GTEDMPTAYH GMSENFLEEN  300
VVFDDDEFEV DDSNFYQELE DLIGKPHDWS GYVSHCLREQ AGVIGAMP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	101	LKNIKRR
2	201	207	LRKRRRL
3	202	206	RKRRR
4	203	207	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-80	HSF family protein