PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g581540.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 747aa    MW: 82713.1 Da    PI: 4.8348
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g581540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.12.3e-06581606530
                       HHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   5 hnerErrRRdriNsafeeLrellPka 30 
                       h+++Er RR++i +++ +L+el+P++
  Pd.00g581540.m01 581 HSIAERLRREKIAERMKNLQELVPNS 606
                       99**********************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MRTRKPKMEK TVAHSQSQPQ SQIEIVNIED DDAFCFTPIS LKRSADHLEE ERGLQSIKAG  60
NFIDLSDETI DFYDDDDELR ILRFKPSNTP FGKRTKPFTG LSVTEAGQSS NSNENPSFVC  120
EICVETKPGN QLFGVENCSH GYCTDCTVNY VASKLQENIT NIRCPVPDCK GLLEAEYCRP  180
ILPPEVFDRW GSVLCESVIL GSEKFYCPYK DCSAMLIDDG KEVIKQSQCL NCWRMFCAQC  240
KVPWHEEIEC EEFQKLNKDE REKEAVMLKN LAQQKQWRRC PNCKFYVEKS EGCMFMMCRC  300
KTAFCYSSSS WSDVDVKERS SWGCCESGQP NEMLLNSAGV DEDDNNSSPT YLTNSNHSME  360
SLAAQDASSI VHDLESDAQD DGKNFKPNLS NGKVDGSFKV ENPGLQYDVD IVTPCSLASL  420
EQLPLNGNMV RTYLSAIEPE NVVCNNRESS IFERFNGDFE TLSSISQLWP LQSYEGVPPS  480
LSPGMGQHRM CSFGLKGEYG DNGTYANAND PNNLAALVTR EGKQDLQNYP LPSFASGPQI  540
TMTMSGLQSL QQATSTTPSA ACTGTGKPRM RARRGQATDP HSIAERLRRE KIAERMKNLQ  600
ELVPNSNRVL SMSRVGAAGA VIPLITDTQQ AKGANGSSLL PSVGQVTDIS FNEIALEQVV  660
RLMESDVTKA MQHLQSKGLC LMPIALADAI STEKRSSSSP APASDDWKKT GTEFGDFRHG  720
ELNLAASQLL VLVHSYSLVV CCGKSLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.18e-36bHLH family protein