PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g581540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 747aa MW: 82713.1 Da PI: 4.8348 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.1 | 2.3e-06 | 581 | 606 | 5 | 30 |
HHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 5 hnerErrRRdriNsafeeLrellPka 30 h+++Er RR++i +++ +L+el+P++ Pd.00g581540.m01 581 HSIAERLRREKIAERMKNLQELVPNS 606 99**********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 747 aa Download sequence |
MRTRKPKMEK TVAHSQSQPQ SQIEIVNIED DDAFCFTPIS LKRSADHLEE ERGLQSIKAG 60 NFIDLSDETI DFYDDDDELR ILRFKPSNTP FGKRTKPFTG LSVTEAGQSS NSNENPSFVC 120 EICVETKPGN QLFGVENCSH GYCTDCTVNY VASKLQENIT NIRCPVPDCK GLLEAEYCRP 180 ILPPEVFDRW GSVLCESVIL GSEKFYCPYK DCSAMLIDDG KEVIKQSQCL NCWRMFCAQC 240 KVPWHEEIEC EEFQKLNKDE REKEAVMLKN LAQQKQWRRC PNCKFYVEKS EGCMFMMCRC 300 KTAFCYSSSS WSDVDVKERS SWGCCESGQP NEMLLNSAGV DEDDNNSSPT YLTNSNHSME 360 SLAAQDASSI VHDLESDAQD DGKNFKPNLS NGKVDGSFKV ENPGLQYDVD IVTPCSLASL 420 EQLPLNGNMV RTYLSAIEPE NVVCNNRESS IFERFNGDFE TLSSISQLWP LQSYEGVPPS 480 LSPGMGQHRM CSFGLKGEYG DNGTYANAND PNNLAALVTR EGKQDLQNYP LPSFASGPQI 540 TMTMSGLQSL QQATSTTPSA ACTGTGKPRM RARRGQATDP HSIAERLRRE KIAERMKNLQ 600 ELVPNSNRVL SMSRVGAAGA VIPLITDTQQ AKGANGSSLL PSVGQVTDIS FNEIALEQVV 660 RLMESDVTKA MQHLQSKGLC LMPIALADAI STEKRSSSSP APASDDWKKT GTEFGDFRHG 720 ELNLAASQLL VLVHSYSLVV CCGKSLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58010.1 | 8e-36 | bHLH family protein |