PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g580880.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 168aa MW: 19713.7 Da PI: 10.2843 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 115 | 161 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++l++++ +q+G+g+W++I+r +Rt+ q+ s+ qky Pd.00g580880.m01 115 RTPWTKHEHKLFLKGLEQYGKGDWRSISRFCVVTRTPTQVASHAQKY 161 789**************************9999*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MEILCFSKGP LCYPSRFSNN LSRLPQPEKP NDDQWTFDEN KRFENALTEL NLDAPYLFQK 60 LRTRVPGKTV AQVKKHFEAL FEDILMIESG HIAAPEYNKI SIESKVTTKP FRRKRTPWTK 120 HEHKLFLKGL EQYGKGDWRS ISRFCVVTRT PTQVASHAQK YFLRVNKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 6e-39 | MYB family protein |