PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g580360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Nin-like
Protein Properties Length: 328aa    MW: 37614.3 Da    PI: 8.5759
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g580360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.45.2e-27201250352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i l+dl+kyF+lpi +A+++L+v+lTvLK++CR++GI+RWPhRkiksl
  Pd.00g580360.m01 201 ANIALSDLAKYFDLPIVEASRNLNVGLTVLKKKCREFGIPRWPHRKIKSL 250
                       79**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MDSSDCEPHL LRSLLVFKNT INQELIRSLH VYRLDEGKEN EVEREFVLSA SEPYVELPVD  60
PLLRLMKFPV SQVHEGHVNG CWVCIFAFQA NCPPNFTCIP SILSVSRNRK LKSIPALAND  120
LQMIFELSNK KPLQRSGEET CRGSNDNNHQ LIRSLPVLDL DLNSLPCPVP MSESSEDQEI  180
GRSLPGIMEK KKKRAPSEHV ANIALSDLAK YFDLPIVEAS RNLNVGLTVL KKKCREFGIP  240
RWPHRKIKSL DGLIRDLQEE TEIQQQENQA AALAVAKRQR MLENEKESIE RKPFLEMKTE  300
TKKFRQDVFK RRHRARLLRS QGLSNSDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.12e-81Nin-like family protein