PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g578660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 546aa MW: 59581.6 Da PI: 6.5051

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g578660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.9	1.2e-29	313	371	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r+aed +++ +tYeg+Hnh+ Pd.00g578660.m01 313 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGtGCPVRKQVQRCAEDRTILATTYEGHHNHP 371 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MESAASDHSI HNCRSIEQPL LSPETAVDHD HHGKRIVDEL DFFADNKGRL MEMRDQTVEV 60 KEEGAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHNMED KHRTNELAVL 120 QAELGRMNVE NQRLRVMISQ VNNNYQALQV QIVTLMQRQQ NQKADHQTPE QHKMINNGSV 180 VVEEKQMMNG FNHIVPRQFM DMGRAEKDEL SQCSLEGCRS QDCSGSPPRN DIVESMECCR 240 STSHVLHRDL SGRISTTNAG EDGPDQEFQG WVPKKVSKMM SPRDVDQASS ETMSMIKKAR 300 VSVRARSEAS MISDGCQWRK YGQKMAKGNP CPRAYYRCTM GTGCPVRKQV QRCAEDRTIL 360 ATTYEGHHNH PLPPAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR SALPNCPPSL 420 ATLSASAPFP TVTLDLTRTP TSSEMPLGQP NQLPPSFPQN MTSVPQILGQ ALSSQSKFSV 480 LDSFQGLDSA THSLADKVNA ATAAITADPN FTAALVAAIT SIVGNVHSNN NTNGNITTRN 540 NSDSNT

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MESAASDHSI HNCRSIEQPL LSPETAVDHD HHGKRIVDEL DFFADNKGRL MEMRDQTVEV  60
KEEGAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHNMED KHRTNELAVL  120
QAELGRMNVE NQRLRVMISQ VNNNYQALQV QIVTLMQRQQ NQKADHQTPE QHKMINNGSV  180
VVEEKQMMNG FNHIVPRQFM DMGRAEKDEL SQCSLEGCRS QDCSGSPPRN DIVESMECCR  240
STSHVLHRDL SGRISTTNAG EDGPDQEFQG WVPKKVSKMM SPRDVDQASS ETMSMIKKAR  300
VSVRARSEAS MISDGCQWRK YGQKMAKGNP CPRAYYRCTM GTGCPVRKQV QRCAEDRTIL  360
ATTYEGHHNH PLPPAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR SALPNCPPSL  420
ATLSASAPFP TVTLDLTRTP TSSEMPLGQP NQLPPSFPQN MTSVPQILGQ ALSSQSKFSV  480
LDSFQGLDSA THSLADKVNA ATAAITADPN FTAALVAAIT SIVGNVHSNN NTNGNITTRN  540
NSDSNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-105	WRKY family protein