PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g576920.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 173aa MW: 19589.7 Da PI: 3.9046 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28 | 4.9e-09 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g WT+eEd +l+ +v+++G +W+ +r g Pd.00g576920.m01 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAG 45 799*****************99**99999887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MVRTPCRDEN GMKKGTWTPE EDRKLIAYVT RYGCWNWRQL PRFAGLVELA VDQLTKNATI 60 LPNADETADH LQVPQTDHDI LDNIFQLSSP QPSSSEVSSL TTDNAAVVLS SVNNDNWVNY 120 VEEDNVISSM EAFADVQFGD DFWTEPFLAD TSYIPCGLST LSMDSEFFYP PFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 7e-16 | MYB family protein |