PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g576540.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 311aa    MW: 34558.2 Da    PI: 6.6322
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g576540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-12142187454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +h e+Er+RR+++N++f  Lr ++P+       +++Ka+ L  Av YI++L
  Pd.00g576540.m01 142 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 187
                       799***********************6.....4***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDHMGLDADV SDGEWFYVMS LARSFSIGES AISASVPGKA FSSGSVVWLT GAHELQFYNC  60
DRAKEAQMHG FQTLVCIPTP TGVLEMGSSD SIRENWSLVQ QAKSLFGSDL ICSPDYSDSD  120
GPKRTPKKRG RKPGLGRDTP LNHVEAERQR REKLNHRFYA LRAVVPNVSR MDKASLLSDA  180
VSYINELKTK VDELESQVQR ESKKVKVETG DNLDIQSTTT SVEQIAKPPS SSANGSGLEV  240
EVKIVGTDAM IRVQSENVNY PSARLMAALR DLELQIHHAS LSCINELMLQ DIVVKQTFRW  300
YKKIVFLIDM S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.16e-71bHLH family protein