PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g576060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 495aa MW: 54484.3 Da PI: 9.3097

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g576060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	90	134	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ Pd.00g576060.m01 90 RERWTHEEHNKFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 134 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS 60 SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG 120 TKTAVQIRSH AQKFFSKLEK EAHINGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST 180 CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVFTLL 240 QDGHCSSVSS ANNNSIPSQV ALGNACTLRD ATNESHVTIE LKGNQNLKKI DAKMIVGDNG 300 TSGAPKSGNT NNAFHKELVQ GEKFSSLIVS SLLQNPAAHA VASSTAAFWP YANAKNRKDP 360 PSMAAIAAAT VTAATAWSAV HRLLPRQTDF SCSPISMIGV PVPSMDTGQA PPAKREKGES 420 SLQIPSLQDQ QLDSRHTEAV EAQHSNIAKA NTDDEKEVAS TEEVHDSNHE RAENRVTVPH 480 MVPTHHPTAK TRQLQ

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEEHIG  120
TKTAVQIRSH AQKFFSKLEK EAHINGVPIG QSIGIDIPPP RPKRKPCNPY PRKSSSAAST  180
CATLHVGAKV GKLLSSASSS CYKQVVDLEK EPLHERPFGE EKANNAENQV ANWAEVFTLL  240
QDGHCSSVSS ANNNSIPSQV ALGNACTLRD ATNESHVTIE LKGNQNLKKI DAKMIVGDNG  300
TSGAPKSGNT NNAFHKELVQ GEKFSSLIVS SLLQNPAAHA VASSTAAFWP YANAKNRKDP  360
PSMAAIAAAT VTAATAWSAV HRLLPRQTDF SCSPISMIGV PVPSMDTGQA PPAKREKGES  420
SLQIPSLQDQ QLDSRHTEAV EAQHSNIAKA NTDDEKEVAS TEEVHDSNHE RAENRVTVPH  480
MVPTHHPTAK TRQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	7e-48	MYB_related family protein