PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g575850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 386aa MW: 43281 Da PI: 4.5784

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g575850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.3	5.8e-27	27	147	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 l ++ k+ ++gk ++ ++i+e+d++k+eP+dL + + + w+ Fs+ + k+ ++ r nratk+g+Wk tgk +e++s+ +++++ Pd.00g575850.m01 27 LFLRFFKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRATKKGFWKITGKPREIKSQqlSKSVT 119 45567789999999999999************85455533447789*********************************97666667 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 k+tL+f++gr +k++ktdWvm+ey l Pd.00g575850.m01 120 CKKRTLTFHEGRVSKSTKTDWVMQEYYL 147 7789********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEGQGSQTMP EIDYKPWNLS DNESISLFLR FFKQMMQGKA SQACHIIPEI DVCKYEPSDL 60 AELLFPDSPY QPRMWFSFSR PHYKSINSLR YNRATKKGFW KITGKPREIK SQQLSKSVTC 120 KKRTLTFHEG RVSKSTKTDW VMQEYYLTQT EPGSIPNQLS DFVLCRMKNK SAHYESDNKK 180 LKDASICDES ADPGISGYMA SNSEDGQAPE NNMIPEADRH LADKELEHDL PGSGNHDAGE 240 PGGCVSADCD DMVQELSAQA GEYLDLPFPP PEPPEPGNAS VPSPIGNNDY SLPNKNNVTT 300 NYDSKPVSNT ASNFKNQTKD EGTSEVYSQP EEDLESFLQL KLDDYTWLSR ILQPEQGNLL 360 QANNSIGCNE LQSPYPETAA LFPQSS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEGQGSQTMP EIDYKPWNLS DNESISLFLR FFKQMMQGKA SQACHIIPEI DVCKYEPSDL  60
AELLFPDSPY QPRMWFSFSR PHYKSINSLR YNRATKKGFW KITGKPREIK SQQLSKSVTC  120
KKRTLTFHEG RVSKSTKTDW VMQEYYLTQT EPGSIPNQLS DFVLCRMKNK SAHYESDNKK  180
LKDASICDES ADPGISGYMA SNSEDGQAPE NNMIPEADRH LADKELEHDL PGSGNHDAGE  240
PGGCVSADCD DMVQELSAQA GEYLDLPFPP PEPPEPGNAS VPSPIGNNDY SLPNKNNVTT  300
NYDSKPVSNT ASNFKNQTKD EGTSEVYSQP EEDLESFLQL KLDDYTWLSR ILQPEQGNLL  360
QANNSIGCNE LQSPYPETAA LFPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	2e-24	NAC family protein